DuplexYieldMetric
Metrics sampled at various levels of coverage via random downsampling.
Fields
| Column | Type | Description |
|---|---|---|
fraction | f64 | Approximate fraction of full dataset used |
read_pairs | usize | Number of read pairs upon which metrics are based |
cs_families | usize | Number of CS (Coordinate & Strand) families |
ss_families | usize | Number of SS (Single-Strand by UMI) families |
ds_families | usize | Number of DS (Double-Strand by UMI) families |
ds_duplexes | usize | Number of DS families that are duplexes (min reads on both strands) |
ds_fraction_duplexes | f64 | Fraction of DS families that are duplexes |
ds_fraction_duplexes_ideal | f64 | Expected fraction of DS families that should be duplexes under ideal model |